Dr. Geoff Fudenberg’s Lab Had Two Papers Published

Dr. Geoff Fudenberg’s (right) lab had two papers published in PLoS Computational biology in collaboration with the Open2C team. The first, with contributions from QCB student Yao Xiao (left), "Cooltools: Enabling high-resolution Hi-C analysis in Python", enables analysis of large sparse 3D genome folding datasets in Python and through the command line (Full article here). The second paper, "Pairtools: From sequencing data to chromosome contacts", discusses a flexible suite of high-performance tools for contact extraction from large-scale sequencing data. (Full article here).